PPDB

 The Plant Proteome Database

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AT2G47090.1   zinc ion binding/nucleic acid binding protein
Lab Annot. zinc ion binding;nucleic acid binding
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G47090.3 11Arabidopsis thaliana076699990 (0)_
AT2G47090.2 11Arabidopsis thaliana076696960 (0)_
AT2G47090.4 11Arabidopsis thaliana076696960 (0)_
Os01g14840.1 7Oryza sativa4E-16577740530 (0)C
Os05g19970.1 7Oryza sativa3E-16230469820 (0)_
Os01g38700.1 7Oryza sativa1E-2410650570 (0)_
v1_GRMZM2G152815_P01 4a53Zea mays8E-16866041580 (0)_
GRMZM2G152815_P01 3.21Zea mays8E-16866041580 (0)_
GRMZM2G432566_P02 3.21Zea mays6E-15530466800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: zf-C3HC4_3(4)
TargetP: Cytoplasm (Class 2 C0.172; M0.102; S0.102; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 766 aa (-cTP 759)
Molecular Weight 85.36 kDA(-cTP )
PI 9.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help