PPDB

PPDB	The Plant Proteome Database

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AT2G47000.1 ATP binding cassette subfamily B4

Lab Annot.

MDR4/PGP4 (P-GLYCOPROTEIN4); xenobiotic-transporting ATPase
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

plasma membrane

TAIR curated location: membrane16243904

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G47000.6 11 Arabidopsis thaliana 0 1286 100 100 0 (0) _
AT2G47000.5 11 Arabidopsis thaliana 0 1286 100 100 0 (0) _
AT2G47000.2 11 Arabidopsis thaliana 0 1169 100 100 0 (0) _
Os01g18670.1 7 Oryza sativa 0 1244 69 83 2 (2) _
Os01g50160.1 7 Oryza sativa 0 1286 60 78 0 (0) _
Os05g47490.1 7 Oryza sativa 0 1280 59 77 0 (0) _
v1_GRMZM2G119894_P01 4a53 Zea mays 0 1249 69 83 1 (1) _
v1_GRMZM2G119894_P03 4a53 Zea mays 0 1249 69 83 1 (1) _
GRMZM2G119894_P03 3.21 Zea mays 0 1249 69 83 4 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_15(2) AAA_16(2) AAA_17(2) AAA_18(2) AAA_21(2) AAA_22(2) AAA_23(2) AAA_24(2)
TargetP:	Cytoplasm (Class 2 C0.128; M0.076; S0.054; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction:	9 TMs
Aramemnon:	11 TMs
TAT position:
Length	1286 aa (-cTP 1264)
Molecular Weight	139.03 kDA(-cTP )
PI	6.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
21826108(SYP trans-Golgi-filtered)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data