PPDB

 The Plant Proteome Database

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AT2G46915.1   DUF3754 family protein%2C putative (DUF3754)
Lab Annot. Protein of unknown function (DUF3754)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46915.2 11Arabidopsis thaliana070893930 (0)C
AT3G19340.1 11Arabidopsis thaliana1E-18222275110 (10)_
AT5G13940.2 11Arabidopsis thaliana1E-1624726510 (0)S
Os06g01460.1 7Oryza sativa065751670 (0)C
Os01g70390.1 7Oryza sativa2E-2222129540 (0)_
Os11g32490.1 7Oryza sativa4E-2224529540 (0)_
Zm00001eb268520_P003 agpv5Zea mays069050660 (0)S
Zm00001eb268520_P002 agpv5Zea mays069048640 (0)S
Zm00001eb268520_P001 agpv5Zea mays069747630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3754(1)
TargetP: Chloroplast (Class 4 C0.896; M0.551; S0.019; _0.007)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 708 aa (-cTP 676)
Molecular Weight 79.38 kDA(-cTP 75.79)
PI 5.67(-cTP 5.24)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1264Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 3) thylakoid membranewild-type
1265Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 3) thylakoid membraneshoot1 (null mutant)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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