PPDB

The Plant Proteome Database

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AT2G46720.1   3-ketoacyl-CoA synthase 13

Lab Annot.
Mapman: 11.1.10 lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10280.1 11Arabidopsis thaliana046697980 (0)S
AT1G01120.1 11Arabidopsis thaliana042465810 (0)_
AT2G26640.1 11Arabidopsis thaliana045956740 (0)_
Os05g49900.1 7Oryza sativa042560770 (0)_
Os02g11070.1 7Oryza sativa041361770 (0)_
Os03g14170.1 7Oryza sativa046154730 (0)_
GRMZM2G156620_P01 3.21Zea mays041560770 (0)_
Zm00001eb296590_P001 agpv5Zea mays041560770 (0)_
v1_GRMZM2G156620_P01 4a53Zea mays041560770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ACP_syn_III(1) ACP_syn_III_C(1) Chal_sti_synt_C(1) Chal_sti_synt_N(1) FAE1_CUT1_
TargetP: Secreted (Class 2 C0.003; M0.007; S0.987; _0.237)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 466 aa (-cTP 389)
Molecular Weight 52.18 kDA(-cTP )
PI 9.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help