PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G46650.1 cytochrome B5 isoform C

Lab Annot.

B5 #1 (cytochrome b5 protein #1); heme binding / transition metal ion binding
Mapman: 21.3 redox.ascorbate and glutathione

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G48810.1 11 Arabidopsis thaliana 4E-44 130 46 69 164 (157) _
AT5G53560.1 11 Arabidopsis thaliana 1E-42 129 49 70 196 (183) _
AT2G32720.1 11 Arabidopsis thaliana 3E-39 129 44 72 8 (8) _
Os10g37420.2 7 Oryza sativa 6E-45 127 50 74 25 (25) _
Os05g01820.1 7 Oryza sativa 5E-41 124 49 71 38 (38) _
Os02g43360.1 7 Oryza sativa 3E-40 122 50 68 0 (0) _
v1_GRMZM2G074169_P04 4a53 Zea mays 1E-43 127 50 70 39 (38) _
v1_GRMZM2G074169_P01 4a53 Zea mays 1E-43 127 50 70 39 (38) _
GRMZM2G074169_P02 3.21 Zea mays 1E-43 127 50 70 38 (38) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cyt-b5(1)
TargetP:	Cytoplasm (Class 3 C0.055; M0.102; S0.254; _0.840)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	132 aa (-cTP 101)
Molecular Weight	14.87 kDA(-cTP )
PI	5.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1569	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1574	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
1575	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1579	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1580	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1582	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1583	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1618	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
1745	Detail								[A. thaliana]		Col-0
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data