PPDB

PPDB	The Plant Proteome Database

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AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46610.2 11 Arabidopsis thaliana 3E-154 220 97 99 0 (0) _
AT2G46610.3 11 Arabidopsis thaliana 7E-154 216 99 100 0 (0) S
AT2G46610.4 11 Arabidopsis thaliana 7E-154 216 99 100 0 (0) S
Os04g02870.2 7 Oryza sativa 8E-91 219 64 77 0 (0) _
Os04g02870.1 7 Oryza sativa 8E-91 219 64 77 0 (0) _
Os02g03040.1 7 Oryza sativa 2E-78 272 52 64 0 (0) _
GRMZM2G021223_P01 3.21 Zea mays 4E-84 233 58 71 0 (0) _
v1_GRMZM2G021223_P01 4a53 Zea mays 4E-84 233 58 71 0 (0) _
Zm00001eb089060_P001 agpv5 Zea mays 4E-84 233 58 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2457(1) DUF4283(2) Nup35_RRM_2(2) PHM7_cyt(2) PRP38_assoc(2) RNA_bind(2) RRM_
TargetP:	Cytoplasm (Class 3 C0.032; M0.395; S0.084; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	250 aa (-cTP 248)
Molecular Weight	29.68 kDA(-cTP )
PI	10.31(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data