PPDB

The Plant Proteome Database

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AT2G46610.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46610.2 11Arabidopsis thaliana3E-15422097990 (0)_
AT2G46610.3 11Arabidopsis thaliana7E-154216991000 (0)S
AT2G46610.4 11Arabidopsis thaliana7E-154216991000 (0)S
Os04g02870.2 7Oryza sativa8E-9121964770 (0)_
Os04g02870.1 7Oryza sativa8E-9121964770 (0)_
Os02g03040.1 7Oryza sativa2E-7827252640 (0)_
GRMZM2G021223_P01 3.21Zea mays4E-8423358710 (0)_
v1_GRMZM2G021223_P01 4a53Zea mays4E-8423358710 (0)_
Zm00001eb089060_P001 agpv5Zea mays4E-8423358710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2457(1) DUF4283(2) Nup35_RRM_2(2) PHM7_cyt(2) PRP38_assoc(2) RNA_bind(2) RRM_
TargetP: Cytoplasm (Class 3 C0.032; M0.395; S0.084; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 250 aa (-cTP 248)
Molecular Weight 29.68 kDA(-cTP )
PI 10.31(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help