PPDB

The Plant Proteome Database

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AT2G46560.1   transducin family protein / WD-40 repeat family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46560.2 11Arabidopsis thaliana024931001000 (0)_
AT2G46560.3 11Arabidopsis thaliana022701001000 (0)_
Os01g37120.1 7Oryza sativa049759750 (0)_
Zm00001eb356500_P001 agpv5Zea mays0255538550 (0)_
GRMZM2G464754_P01 3.21Zea mays0158335520 (0)_
v1_GRMZM2G464754_P01 4a53Zea mays0158335520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(5) Rav1p_C(2) WD40(9)
TargetP: Mitochondria (Class 3 C0.116; M0.811; S0.004; _0.275)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 2513 aa (-cTP 2444)
Molecular Weight 275.52 kDA(-cTP )
PI 5.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
18686298(tonoplast - phosphoproteome (leaves))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help