PPDB

The Plant Proteome Database

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AT2G46550.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46550.3 11Arabidopsis thaliana03291001000 (0)M
AT2G46550.2 11Arabidopsis thaliana02571001000 (0)_
AT1G01240.4 11Arabidopsis thaliana3E-5241037510 (0)M
Os09g19890.1 7Oryza sativa3E-3746030450 (0)M
Os09g19890.2 7Oryza sativa3E-3746030450 (0)M
Os08g30930.1 7Oryza sativa2E-3130132510 (0)M
Zm00001eb042150_P004 agpv5Zea mays4E-3947128420 (0)M
v1_GRMZM2G440313_P02 4a53Zea mays4E-3947128420 (0)M
v1_GRMZM2G440313_P01 4a53Zea mays4E-3947128420 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: tRNA_int_endo_N(2)
TargetP: Chloroplast (Class 5 C0.385; M0.333; S0.003; _0.118)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 397 aa (-cTP 343)
Molecular Weight 44.41 kDA(-cTP 38.58)
PI 9.00(-cTP 8.67)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help