PPDB

The Plant Proteome Database

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AT2G46330.1   arabinogalactan protein 16

Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61640.1 11Arabidopsis thaliana3E-367486900 (0)S
AT2G46330.2 11Arabidopsis thaliana9E-204292950 (0)S
AT5G53250.1 11Arabidopsis thaliana2E-165362790 (0)S
Os01g46850.1 7Oryza sativa4E-227164740 (0)S
Os05g12580.1 7Oryza sativa1E-173886940 (0)S
Os02g16500.1 7Oryza sativa1E-143881860 (0)S
GRMZM2G050286_P02 3.21Zea mays1E-166270820 (0)S
Zm00001eb350580_P001 agpv5Zea mays1E-166270820 (0)S
v1_GRMZM2G050286_P01 4a53Zea mays1E-166270820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AGP(1) DUF4220(1) DUF4231(1)
TargetP: Secreted (Class 1 C0.013; M0.044; S0.990; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 73 aa (-cTP 20)
Molecular Weight 7.60 kDA(-cTP )
PI 4.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help