PPDB

The Plant Proteome Database

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AT2G46300.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot. unknown protein - Harpin-induced protein 1 (Hin1)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01110.1 11Arabidopsis thaliana1E-5625843600 (0)_
AT1G01453.1 11Arabidopsis thaliana2E-5425442590 (0)_
AT1G01453.2 11Arabidopsis thaliana1E-5325043590 (0)_
Os01g39290.1 7Oryza sativa6E-1417530500 (0)_
Os02g16030.1 7Oryza sativa5E-1314626490 (0)C
Os01g09880.1 7Oryza sativa7E-0815026462 (2)_
GRMZM2G096655_P01 3.21Zea mays6E-1719228470 (0)C
Zm00001eb357160_P001 agpv5Zea mays6E-1719228470 (0)C
v1_GRMZM2G096655_P01 4a53Zea mays6E-1719228470 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1) SNARE(1)
TargetP: Cytoplasm (Class 3 C0.125; M0.193; S0.018; _0.706)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 252 aa (-cTP 176)
Molecular Weight 27.56 kDA(-cTP )
PI 9.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help