PPDB

The Plant Proteome Database

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AT2G46210.1   Fatty acid/sphingolipid desaturase

Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61580.1 11Arabidopsis thaliana044979890 (0)_
AT1G26340.1 11Arabidopsis thaliana1E-1076425630 (30)_
AT5G53560.1 11Arabidopsis thaliana7E-10574068196 (183)_
Os09g16920.1 7Oryza sativa044360746 (6)C
Os05g01820.1 7Oryza sativa1E-1061456738 (38)_
Os08g29669.1 7Oryza sativa8E-106046617 (7)S
Zm00001eb098340_P001 agpv5Zea mays044558730 (0)_
v1_GRMZM2G179120_P01 4a53Zea mays044558732 (2)_
Zm00001eb098340_P002 agpv5Zea mays044558730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cyt-b5(1) DUF2207(2) FA_desaturase(2)
TargetP: Cytoplasm (Class 1 C0.039; M0.151; S0.113; _0.955)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 449 aa (-cTP 437)
Molecular Weight 51.50 kDA(-cTP )
PI 9.12(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help