PPDB

The Plant Proteome Database

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AT2G46170.1   Reticulon family protein

Lab Annot. Reticulon protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61560.1 11Arabidopsis thaliana1E-14225182920 (0)_
AT3G61560.2 11Arabidopsis thaliana1E-14225182920 (0)_
AT2G46170.2 11Arabidopsis thaliana4E-12517799991 (1)_
Os05g45050.1 7Oryza sativa1E-98239617715 (15)_
Os01g12650.1 7Oryza sativa3E-91203618040 (40)_
Os01g53520.1 7Oryza sativa3E-9125657729 (9)_
GRMZM2G031308_P02 3.21Zea mays8E-101257607514 (14)_
GRMZM2G031308_P01 3.21Zea mays8E-101257607514 (14)_
Zm00001eb153940_P001 agpv5Zea mays8E-10125760750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Reticulon(1)
TargetP: Cytoplasm (Class 3 C0.322; M0.070; S0.142; _0.863)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 255 aa (-cTP 226)
Molecular Weight 28.69 kDA(-cTP )
PI 7.16(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
16618929(ER-LOPIT-callus)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help