PPDB

PPDB	The Plant Proteome Database

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AT2G46140.1 Late embryogenesis abundant protein

Lab Annot.

Mapman: 33.2 development.late embryogenesis abundant

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G01470.1 11 Arabidopsis thaliana 8E-63 151 61 74 90 (69) _
AT2G44060.1 11 Arabidopsis thaliana 8E-17 161 31 47 258 (231) _
AT2G44060.2 11 Arabidopsis thaliana 8E-17 161 31 47 258 (231) _
Os05g50710.1 7 Oryza sativa 3E-63 151 55 78 30 (30) _
Os01g43530.1 7 Oryza sativa 2E-60 148 56 76 0 (0) _
Os01g12580.1 7 Oryza sativa 2E-57 151 52 72 0 (0) _
Zm00001eb159430_P001 agpv5 Zea mays 4E-65 165 52 72 0 (0) _
GRMZM2G042421_P01 3.21 Zea mays 4E-65 165 52 72 0 (0) _
v1_GRMZM2G042421_P01 4a53 Zea mays 4E-65 165 52 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4738(1) LEA_2(1)
TargetP:	Cytoplasm (Class 2 C0.078; M0.086; S0.138; _0.848)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	166 aa (-cTP 163)
Molecular Weight	17.85 kDA(-cTP )
PI	4.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data