PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G46030.1   ubiquitin-conjugating enzyme 6

Lab Annot. ubiquitin-conjugating enzyme 6
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G46030.3 11Arabidopsis thaliana5E-1341831001000 (0)M
AT2G46030.5 11Arabidopsis thaliana2E-1331831001000 (0)_
AT2G46030.4 11Arabidopsis thaliana9E-12217198980 (0)S
Os10g31000.1 7Oryza sativa3E-95183748420 (20)_
Os10g31000.2 7Oryza sativa2E-86140829220 (20)_
Os06g30970.1 7Oryza sativa2E-2714837545 (5)_
GRMZM2G053764_P02 3.21Zea mays1E-94183728316 (15)_
Zm00001eb046980_P001 agpv5Zea mays1E-9418372830 (0)_
v1_GRMZM2G162874_P02 4a53Zea mays1E-94183728316 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cwf_Cwc_15(1) UQ_con(1)
TargetP: Cytoplasm (Class 2 C0.040; M0.193; S0.207; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 183 aa (-cTP 166)
Molecular Weight 20.78 kDA(-cTP )
PI 4.12(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help