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PPDB	The Plant Proteome Database

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AT2G46020.1 transcription regulatory protein SNF2

Lab Annot.

transcription regulatory protein SNF2, Helicase conserved C-terminal domain
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46020.6 11 Arabidopsis thaliana 0 2192 100 100 0 (0) C
AT2G46020.5 11 Arabidopsis thaliana 0 2192 100 100 0 (0) C
AT2G46020.3 11 Arabidopsis thaliana 0 2193 99 99 0 (0) C
Os02g02290.1 7 Oryza sativa 0 2186 54 67 15 (15) C
Os05g05230.1 7 Oryza sativa 2E-158 772 40 56 0 (0) C
Os05g05780.1 7 Oryza sativa 1E-106 468 43 61 0 (0) _
Zm00001eb229760_P002 agpv5 Zea mays 0 2212 54 67 0 (0) C
Zm00001eb229760_P003 agpv5 Zea mays 0 2212 54 67 0 (0) C
v1_GRMZM2G163849_P03 4a53 Zea mays 0 2002 58 71 7 (7) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) Bromodomain(1) DEAD(2) Helicase_C(2) ResIII(1) SNF2_N(1)
TargetP:	Chloroplast (Class 3 C0.769; M0.253; S0.007; _0.101)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	2192 aa (-cTP 2111)
Molecular Weight	245.44 kDA(-cTP 236.92)
PI	8.98(-cTP 8.93)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data