PPDB

 The Plant Proteome Database

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AT2G45950.1   SKP1-like 20
Lab Annot. SKP1-like 20
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G45950.4 11Arabidopsis thaliana03421001000 (0)_
AT2G45950.3 11Arabidopsis thaliana03421001000 (0)_
AT2G45950.5 11Arabidopsis thaliana03391001000 (0)_
Os03g01660.1 7Oryza sativa2E-13934963760 (0)_
Os09g36830.1 7Oryza sativa2E-12157305117 (17)_
Os09g10300.1 7Oryza sativa2E-1114831540 (0)_
v1_GRMZM2G109725_P01 4a53Zea mays1E-13634462740 (0)_
Zm00001eb000550_P005 agpv5Zea mays1E-13634462740 (0)_
Zm00001eb000550_P006 agpv5Zea mays1E-13634462740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1752(1) Skp1(1) Skp1_POZ(1)
TargetP: Cytoplasm (Class 1 C0.039; M0.120; S0.102; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 342 aa (-cTP 258)
Molecular Weight 39.43 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help