PPDB

The Plant Proteome Database

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AT2G45850.1   AT hook motif DNA-binding family protein

Lab Annot. DNA-binding protein
Mapman: 28.99 DNA.unspecified
Curated Location
TAIR curated location: nucleus15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G45850.2 11Arabidopsis thaliana03481001001 (1)_
AT2G45850.3 11Arabidopsis thaliana027798980 (0)_
AT3G61310.1 11Arabidopsis thaliana3E-12737563710 (0)_
Os02g57820.1 7Oryza sativa5E-6828445590 (0)_
Os04g49990.2 7Oryza sativa2E-6120652690 (0)_
Os04g49990.1 7Oryza sativa2E-6120652690 (0)_
Zm00001eb190840_P001 agpv5Zea mays4E-6728944600 (0)_
v1_GRMZM2G123887_P01 4a53Zea mays4E-6728944601 (1)_
GRMZM2G123887_P01 3.21Zea mays4E-6728944600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AT_hook(2) PCC(1)
TargetP: Cytoplasm (Class 5 C0.113; M0.414; S0.002; _0.523)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 279)
Molecular Weight 36.33 kDA(-cTP )
PI 9.94(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


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