PPDB

The Plant Proteome Database

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AT2G45240.1   methionine aminopeptidase 1A

Lab Annot. methionyl aminopeptidase (MAP2A)
Mapman: 29.5.7.6.1* protein.degradation.metalloprotease.MG.M24
Curated Location cytosol (Pubmed: 11060042 )

TAIR curated location: cytoplasm11060042
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G45240.2 11Arabidopsis thaliana03211001000 (0)_
AT1G13270.1 11Arabidopsis thaliana7E-932845066236 (126)C
AT4G37040.1 11Arabidopsis thaliana6E-85283486220 (9)M
Os10g36470.2 7Oryza sativa038680900 (0)_
Os04g52100.1 7Oryza sativa3E-8631844590 (0)C
Os02g52420.1 7Oryza sativa5E-8332543560 (0)M
Zm00001eb220650_P004 agpv5Zea mays039080880 (0)_
v1_GRMZM2G422516_P01 4a53Zea mays039080880 (0)_
GRMZM5G837364_P02 3.21Zea mays039080880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_M24(1) zf-C6H2(1) zf-MYND(1)
TargetP: Cytoplasm (Class 5 C0.514; M0.042; S0.118; _0.575)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 398 aa (-cTP 318)
Molecular Weight 43.99 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2300Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help