PPDB

 The Plant Proteome Database

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AT2G45170.1   AUTOPHAGY 8E
Lab Annot. ATG8e - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
TAIR curated location: membrane & cytoplasm & autophagic vacuole15860017
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G45170.2 11Arabidopsis thaliana1E-8412210010016 (15)_
AT4G16520.2 11Arabidopsis thaliana1E-6811784921 (1)_
AT4G16520.1 11Arabidopsis thaliana1E-6811784921 (1)_
Os08g09240.2 7Oryza sativa3E-6411478920 (0)_
Os08g09240.1 7Oryza sativa3E-6411478920 (0)_
Os04g53240.1 7Oryza sativa4E-6311478900 (0)_
Zm00001eb431210_P004 agpv5Zea mays6E-6611878900 (0)_
Zm00001eb431210_P002 agpv5Zea mays6E-6611878900 (0)_
Zm00001eb431210_P003 agpv5Zea mays6E-6611878900 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 1 C0.070; M0.070; S0.061; _0.949)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 122 aa (-cTP 51)
Molecular Weight 13.95 kDA(-cTP )
PI 7.82(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help