PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G44980.1   SNF2 domain-containing protein / helicase domain-containing protein
Lab Annot.
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44980.2 11Arabidopsis thaliana087097970 (0)_
AT2G44980.3 11Arabidopsis thaliana087097970 (0)_
AT5G18620.1 11Arabidopsis thaliana1E-11648143633 (3)_
Os03g01200.1 7Oryza sativa082361750 (0)_
Os01g27040.1 7Oryza sativa4E-11650642624 (4)_
ChrUn.fgenesh.mRNA.85 7Oryza sativa8E-11650642620 (0) 
Zm00001eb404510_P002 agpv5Zea mays089060760 (0)_
Zm00001eb404510_P001 agpv5Zea mays082061760 (0)C
GRMZM2G049168_P01 3.21Zea mays082061760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HDA2-3(1) Helicase_C(1) SNF2_N(2)
TargetP: Cytoplasm (Class 2 C0.113; M0.134; S0.092; _0.827)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 851 aa (-cTP 831)
Molecular Weight 95.88 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help