PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G44530.1 Phosphoribosyltransferase family protein

Lab Annot.

ribose-phosphate pyrophosphokinase
Mapman: 23.1.3 nucleotide metabolism.synthesis.PRS-PP

Curated Location

plastid stroma (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G44530.2 11 Arabidopsis thaliana 0 394 99 99 195 (106) C
AT1G32380.1 11 Arabidopsis thaliana 0 350 81 90 45 (20) C
AT2G35390.2 11 Arabidopsis thaliana 0 365 78 87 135 (45) C
Os02g03540.1 7 Oryza sativa 0 382 77 84 15 (15) C
Os03g01018.1 7 Oryza sativa 0 307 84 93 0 (0) C
Os06g41360.1 7 Oryza sativa 3E-180 307 79 89 0 (0) C
GRMZM2G038791_P02 3.21 Zea mays 0 322 87 93 29 (29) _
GRMZM2G038791_P01 3.21 Zea mays 0 343 83 89 65 (65) C
v1_GRMZM2G038791_P02 4a53 Zea mays 0 331 84 90 40 (40) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NifU(1) Pribosyl_synth(2) Pribosyltran(1) Pribosyltran_N(1) UPRTase(2)
TargetP:	Chloroplast (Class 3 C0.827; M0.309; S0.048; _0.043)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	394 aa (-cTP 361)
Molecular Weight	42.62 kDA(-cTP 38.98)
PI	6.71(-cTP 5.79)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1176	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	wild-type
1177	Detail								leaf [A. thaliana]	co-IP OEC23 stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1179	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1
1180	Detail								leaf [A. thaliana]	co-IP OEC23 stroma	clpr2-1
1196	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1197	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	clpr2-1
1214	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1215	Detail								leaf [A. thaliana]	co-IP ClpR2 stroma	wild-type
1291	Detail								leaf [A. thaliana]	co-IP preserum cGEP (rep. 1) stroma	wild-type
1292	Detail								leaf [A. thaliana]	co-IP cGEP (rep. 1) stroma	wild-type
1293	Detail								leaf [A. thaliana]	co-IP preserum cGEP (rep. 2) stroma	wild-type
1294	Detail								leaf [A. thaliana]	co-IP cGEP (rep. 2) stroma	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1507	Detail								[A. thaliana]		wild-type
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1633	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
1634	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
1635	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
1636	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
1637	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1638	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1639	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
1640	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
1664	Detail								[A. thaliana]
1665	Detail								[A. thaliana]
1666	Detail								[A. thaliana]
1669	Detail								[A. thaliana]
1670	Detail								[A. thaliana]
1672	Detail								[A. thaliana]
1700	Detail								[A. thaliana]		Col-0
1703	Detail								[A. thaliana]		cGep
1756	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1757	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1930	Detail								leaf [A. thaliana]	total leaf tissue	Col_0 Wild-type
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1984	Detail								leaf [A. thaliana]	plastid	wild-type
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1987	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2115	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2121	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2122	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2124	Detail								leaf [A. thaliana]	Stroma stroma	wild type
2125	Detail								leaf [A. thaliana]	Stroma stroma	wild type
2127	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2128	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2130	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
2214	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2263	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 trap
2266	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2267	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 TRAP
2287	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2304	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
20706207(cell cycle interactome (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data