PPDB

 The Plant Proteome Database

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AT2G44230.1   hypothetical protein (DUF946)
Lab Annot. unknown protein DUF239 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44260.1 11Arabidopsis thaliana053465790 (0)_
AT2G44260.2 11Arabidopsis thaliana056461750 (0)_
AT3G01870.1 11Arabidopsis thaliana054455700 (0)S
Os07g38840.1 7Oryza sativa055152660 (0)S
Os07g38840.2 7Oryza sativa2E-17852352650 (0)_
Os03g04930.1 7Oryza sativa3E-16453445630 (0)_
GRMZM5G889052_P01 3.21Zea mays055750640 (0)_
Zm00001eb325330_P001 agpv5Zea mays055750640 (0)_
Zm00001eb003480_P001 agpv5Zea mays5E-15853844610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Vps62(1)
TargetP: Chloroplast (Class 3 C0.833; M0.037; S0.126; _0.353)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 542 aa (-cTP 496)
Molecular Weight 59.89 kDA(-cTP 55.19)
PI 5.62(-cTP 5.82)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help