PPDB

The Plant Proteome Database

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AT2G44200.1   pre-mRNA splicing factor domain-containing protein

Lab Annot. CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44195.1 11Arabidopsis thaliana1E-4715358690 (0)_
Os08g39090.1 7Oryza sativa3E-9353445600 (0)_
GRMZM2G080912_P01 3.21Zea mays2E-10851745580 (0)_
Zm00001eb034090_P002 agpv5Zea mays2E-10851745580 (0)_
v1_GRMZM2G080912_P01 4a53Zea mays2E-10851745583 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cir_N(3) CWC25(2)
TargetP: Cytoplasm (Class 3 C0.129; M0.247; S0.009; _0.715)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 493 aa (-cTP 469)
Molecular Weight 57.78 kDA(-cTP )
PI 9.52(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help