PPDB

 The Plant Proteome Database

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AT2G44100.1   guanosine nucleotide diphosphate dissociation inhibitor 1
Lab Annot. ATGDI1 (guanosine diphosphate dissociation inhibitor 1)
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G44100.2 11Arabidopsis thaliana0428100100164 (27)_
AT3G59920.1 11Arabidopsis thaliana04449195122 (54)_
AT5G09550.1 11Arabidopsis thaliana044477895 (3)_
Os05g23860.1 7Oryza sativa0444859311 (11)_
Os05g34540.1 7Oryza sativa0444859319 (19)_
Os07g16970.1 7Oryza sativa044579900 (0)_
Zm00001eb349250_P001 agpv5Zea mays049175830 (0)_
Zm00001eb097240_P001 agpv5Zea mays044580910 (0)_
GRMZM2G047431_P01 3.21Zea mays0445809118 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Amino_oxidase(2) GDI(1)
TargetP: Cytoplasm (Class 4 C0.058; M0.062; S0.485; _0.830)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 445 aa (-cTP 389)
Molecular Weight 49.82 kDA(-cTP )
PI 5.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help