PPDB

PPDB	The Plant Proteome Database

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AT2G43940.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot.

Thiopurine S-methyltransferase (TPMT)
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G43910.1 11 Arabidopsis thaliana 4E-90 203 61 76 250 (164) _
AT2G43920.1 11 Arabidopsis thaliana 8E-85 194 58 76 0 (0) _
AT2G43910.2 11 Arabidopsis thaliana 5E-83 193 59 76 211 (142) _
Os06g06040.1 7 Oryza sativa 3E-96 205 63 81 0 (0) M
Os06g06040.2 7 Oryza sativa 1E-73 205 53 69 0 (0) M
Os03g62670.1 7 Oryza sativa 9E-69 236 48 64 0 (0) _
GRMZM2G405178_P02 3.21 Zea mays 8E-94 204 60 79 1 (1) M
GRMZM2G405178_P01 3.21 Zea mays 9E-17 64 48 73 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CheR(2) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(1) Methyltransf_25
TargetP:	Cytoplasm (Class 4 C0.282; M0.160; S0.040; _0.578)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	226 aa (-cTP 205)
Molecular Weight	25.04 kDA(-cTP )
PI	5.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
12938931(Total chloroplast envelope)
15815986(seedling)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data