PPDB

 The Plant Proteome Database

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AT2G43870.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59850.2 11Arabidopsis thaliana036983920 (0)M
AT3G59850.1 11Arabidopsis thaliana036983920 (0)S
AT2G43890.1 11Arabidopsis thaliana6E-15438854734 (4)S
Os01g43490.1 7Oryza sativa2E-13539050680 (0)S
Os01g66710.1 7Oryza sativa3E-12238249640 (0)S
Os11g14410.1 7Oryza sativa3E-10234048630 (0)S
Zm00001eb145110_P001 agpv5Zea mays8E-13039551650 (0)S
GRMZM2G026855_P01 3.21Zea mays8E-13039551650 (0)S
v1_GRMZM2G026855_P01 4a53Zea mays8E-13039551650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(1) Pectate_lyase_3(1)
TargetP: Secreted (Class 3 C0.211; M0.014; S0.747; _0.034)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 384 aa (-cTP 318)
Molecular Weight 40.81 kDA(-cTP )
PI 8.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help