PPDB

 The Plant Proteome Database

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AT2G43860.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43870.1 11Arabidopsis thaliana4E-15437355740 (0)S
AT3G59850.2 11Arabidopsis thaliana9E-15236856720 (0)M
AT3G59850.1 11Arabidopsis thaliana1E-15136856720 (0)S
Os01g43490.1 7Oryza sativa2E-11737247650 (0)S
Os01g66710.1 7Oryza sativa6E-10838444600 (0)S
Os11g14410.1 7Oryza sativa9E-9033444600 (0)S
Zm00001eb145110_P001 agpv5Zea mays4E-10537544600 (0)S
GRMZM2G026855_P01 3.21Zea mays4E-10537544600 (0)S
v1_GRMZM2G026855_P01 4a53Zea mays4E-10537544600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(1) Pectate_lyase_3(2)
TargetP: Secreted (Class 1 C0.005; M0.019; S0.976; _0.054)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 405 aa (-cTP 345)
Molecular Weight 43.46 kDA(-cTP )
PI 6.38(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help