PPDB

PPDB	The Plant Proteome Database

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AT2G43780.1 cytochrome oxidase assembly protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G43780.4 11 Arabidopsis thaliana 1E-42 67 100 100 0 (0) S
AT2G43780.3 11 Arabidopsis thaliana 1E-42 67 100 100 0 (0) M
AT2G43780.2 11 Arabidopsis thaliana 1E-42 67 100 100 9 (6) M
Os12g41760.1 7 Oryza sativa 4E-23 54 77 83 0 (0) _
Os05g01330.1 7 Oryza sativa 2E-21 53 77 83 0 (0) _
GRMZM2G163546_P01 3.21 Zea mays 9E-23 62 66 72 0 (0) M
GRMZM2G071223_P01 3.21 Zea mays 9E-23 62 66 72 0 (0) M
GRMZM2G071223_P02 3.21 Zea mays 9E-23 62 66 72 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Coiled-coil_56(1)
TargetP:	Mitochondria (Class 5 C0.017; M0.450; S0.343; _0.427)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	67 aa (-cTP 48)
Molecular Weight	7.14 kDA(-cTP )
PI	8.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data