PPDB

PPDB	The Plant Proteome Database

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AT2G43770.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49660.1 11 Arabidopsis thaliana 3E-42 298 31 52 0 (0) C
AT4G02730.1 11 Arabidopsis thaliana 6E-32 293 29 49 0 (0) _
AT5G64730.1 11 Arabidopsis thaliana 1E-26 298 27 42 0 (0) _
Os06g44370.1 7 Oryza sativa 0 337 77 87 0 (0) C
Os03g51550.1 7 Oryza sativa 2E-37 295 30 50 2 (2) C
Os03g51550.2 7 Oryza sativa 2E-37 295 30 50 2 (2) C
v1_GRMZM2G089857_P01 4a53 Zea mays 0 337 76 86 12 (12) _
Zm00001eb389600_P003 agpv5 Zea mays 0 337 78 87 0 (0) C
Zm00001eb389600_P002 agpv5 Zea mays 0 337 78 87 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(4) Frtz(3) Ge1_WD40(4) Nbas_N(3) Nup160(3) PALB2_WD40(2) PD40(2) WD4
TargetP:	Chloroplast (Class 5 C0.637; M0.033; S0.027; _0.614)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	343 aa (-cTP 289)
Molecular Weight	37.89 kDA(-cTP 32.14)
PI	6.89(-cTP 7.29)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2174	Detail								leaf [A. thaliana]	stroma Clp	gst clpF against clpFclpS1
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
21173025(root proteome)

Comparative Proteomics Data