PPDB

The Plant Proteome Database

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AT2G43770.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49660.1 11Arabidopsis thaliana3E-4229831520 (0)C
AT4G02730.1 11Arabidopsis thaliana6E-3229329490 (0)_
AT5G64730.1 11Arabidopsis thaliana1E-2629827420 (0)_
Os06g44370.1 7Oryza sativa033777870 (0)C
Os03g51550.1 7Oryza sativa2E-3729530502 (2)C
Os03g51550.2 7Oryza sativa2E-3729530502 (2)C
v1_GRMZM2G089857_P01 4a53Zea mays0337768612 (12)_
Zm00001eb389600_P003 agpv5Zea mays033778870 (0)C
Zm00001eb389600_P002 agpv5Zea mays033778870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) Frtz(3) Ge1_WD40(4) Nbas_N(3) Nup160(3) PALB2_WD40(2) PD40(2) WD4
TargetP: Chloroplast (Class 5 C0.637; M0.033; S0.027; _0.614)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 343 aa (-cTP 289)
Molecular Weight 37.89 kDA(-cTP 32.14)
PI 6.89(-cTP 7.29)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2174Detail       leaf [A. thaliana] stroma Clp gst clpF against clpFclpS1
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
21173025(root proteome)

Comparative Proteomics Data


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