PPDB

The Plant Proteome Database

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AT2G43610.1   Chitinase family protein

Lab Annot. glycoside hydrolase family 19 protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43620.1 11Arabidopsis thaliana8E-173283818820 (7)S
AT1G56680.1 11Arabidopsis thaliana1E-11828562700 (0)S
AT1G56680.2 11Arabidopsis thaliana2E-11828562700 (0)_
Os04g41680.1 7Oryza sativa5E-8826852650 (0)S
Os02g39330.1 7Oryza sativa9E-8125749640 (0)S
Os04g41620.1 7Oryza sativa5E-7320353683 (3)S
GRMZM2G005633_P02 3.21Zea mays3E-8227947621 (1)S
Zm00001eb425600_P001 agpv5Zea mays3E-8227947620 (0)S
v1_GRMZM2G005633_P01 4a53Zea mays3E-8227947621 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Chitin_bind_1(2) Glyco_hydro_19(3)
TargetP: Secreted (Class 1 C0.004; M0.020; S0.930; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 281 aa (-cTP 240)
Molecular Weight 30.00 kDA(-cTP )
PI 9.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
19334764(plasma membrane (cell culture))
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21311031(mitochondria)
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help