PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G43600.1   Chitinase family protein

Lab Annot.
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43600.2 11Arabidopsis thaliana02731001000 (0)S
AT1G56680.1 11Arabidopsis thaliana5E-12027260740 (0)S
AT1G56680.2 11Arabidopsis thaliana6E-12027260740 (0)_
Os02g39330.1 7Oryza sativa5E-5525140580 (0)S
Os04g41680.1 7Oryza sativa2E-5125138550 (0)S
Os04g41620.1 7Oryza sativa2E-4520339593 (3)S
GRMZM2G005633_P02 3.21Zea mays4E-5327638531 (1)S
Zm00001eb425600_P001 agpv5Zea mays4E-5327638530 (0)S
v1_GRMZM2G005633_P01 4a53Zea mays4E-5327638531 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Chitin_bind_1(2) Glyco_hydro_19(3)
TargetP: Secreted (Class 1 C0.031; M0.014; S0.991; _0.049)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 273 aa (-cTP 257)
Molecular Weight 30.92 kDA(-cTP )
PI 8.70(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help