PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G43535.1   Scorpion toxin-like knottin superfamily protein

Lab Annot. trypsin protease inhibitor protein
Mapman: 29.5.5.10.5* protein.degradation.serine protease.inhibitor.JD-i18
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47540.1 11Arabidopsis thaliana1E-379264775 (3)S
AT1G47540.2 11Arabidopsis thaliana8E-369363765 (3)S
AT2G43520.1 11Arabidopsis thaliana2E-338758788 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SLR1-BP(2) Toxin_3(1)
TargetP: Secreted (Class 1 C0.008; M0.014; S0.996; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 97 aa (-cTP 92)
Molecular Weight 10.67 kDA(-cTP )
PI 5.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
18998720(SA-induced secreted proteome (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help