PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G43470.1   zinc finger CCCH domain protein%2C putative (DUF3755)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07565.3 11Arabidopsis thaliana2E-2418933510 (0)C
AT3G07565.1 11Arabidopsis thaliana1E-2318833520 (0)C
AT3G07565.4 11Arabidopsis thaliana3E-2219833500 (0)C
Os05g24000.1 7Oryza sativa8E-2119632480 (0)C
Os05g24000.2 7Oryza sativa7E-2019631480 (0)C
Os04g41830.1 7Oryza sativa4E-1818933520 (0)_
GRMZM2G053557_P01 3.21Zea mays5E-2218933510 (0)_
v1_GRMZM2G053557_P01 4a53Zea mays5E-2218933510 (0)_
Zm00001eb078600_P004 agpv5Zea mays5E-2218933510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AIPR(1) DUF3755(1) Myb_DNA-bind_6(2)
TargetP: Cytoplasm (Class 4 C0.306; M0.077; S0.083; _0.654)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 203)
Molecular Weight 24.05 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help