PPDB

The Plant Proteome Database

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AT2G43140.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43140.2 11Arabidopsis thaliana1E-1542071001000 (0)_
AT1G05805.1 11Arabidopsis thaliana1E-7221057710 (0)C
AT1G35460.1 11Arabidopsis thaliana5E-3613751691 (0)C
Os04g41229.1 7Oryza sativa3E-4120243590 (0)M
Os02g39140.1 7Oryza sativa2E-4018748630 (0)M
Os01g67480.1 7Oryza sativa2E-4015849670 (0)_
Zm00001eb246520_P001 agpv5Zea mays7E-4213157740 (0)M
GRMZM2G153454_P01 3.21Zea mays8E-4219945620 (0)_
GRMZM2G153454_P02 3.21Zea mays8E-4219945620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2423(2) HLH(1)
TargetP: Chloroplast (Class 5 C0.616; M0.063; S0.009; _0.586)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 212 aa (-cTP 159)
Molecular Weight 23.39 kDA(-cTP 17.83)
PI 8.93(-cTP 9.33)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help