PPDB

The Plant Proteome Database

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AT2G43000.1   NAC domain containing protein 42

Lab Annot. JUNGBRUNNEN1 (JUB1) (also ANAC042) senescence
Mapman: 27.3.27 RNA.regulation of transcription.NAC domain transcription factor family; 33.3* development.senescence
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G43000.2 11Arabidopsis thaliana9E-1471971001000 (0)M
AT3G12910.1 11Arabidopsis thaliana3E-7418365740 (0)_
AT5G39820.1 11Arabidopsis thaliana5E-7129043560 (0)_
Os03g56580.1 7Oryza sativa3E-8321459700 (0)_
Os07g04560.1 7Oryza sativa4E-7524752630 (0)_
Os08g33910.1 7Oryza sativa2E-7322050670 (0)_
v1_GRMZM2G112548_P01 4a53Zea mays2E-8119562750 (0)_
Zm00001eb213710_P001 agpv5Zea mays2E-8119562750 (0)_
GRMZM2G112548_P01 3.21Zea mays2E-8119562750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAM(1)
TargetP: Cytoplasm (Class 1 C0.053; M0.118; S0.128; _0.945)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 275 aa (-cTP 267)
Molecular Weight 31.46 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help