PPDB

The Plant Proteome Database

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AT2G42940.1   Putative AT-hook DNA-binding family protein

Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G35270.1 11Arabidopsis thaliana6E-6115465830 (0)_
AT1G76500.1 11Arabidopsis thaliana2E-6017261770 (0)_
AT3G60870.1 11Arabidopsis thaliana7E-5917856700 (0)_
Os02g25020.1 7Oryza sativa7E-6716169830 (0)_
Os06g04540.1 7Oryza sativa1E-5920653700 (0)_
Os04g50030.1 7Oryza sativa2E-5515066840 (0)_
v1_GRMZM2G105498_P01 4a53Zea mays9E-6720658720 (0)_
Zm00001eb238350_P001 agpv5Zea mays9E-6720658720 (0)_
GRMZM2G105498_P01 3.21Zea mays9E-6720658720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PCC(1)
TargetP: Chloroplast (Class 2 C0.923; M0.073; S0.011; _0.155)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 257 aa (-cTP 209)
Molecular Weight 27.00 kDA(-cTP 22.03)
PI 9.32(-cTP 9.00)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help