PPDB

PPDB	The Plant Proteome Database

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AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42920.2 11 Arabidopsis thaliana 0 559 100 100 0 (0) C
AT5G48910.1 11 Arabidopsis thaliana 5E-143 514 42 63 4 (4) C
AT5G66520.1 11 Arabidopsis thaliana 9E-126 515 38 60 4 (4) _
Os03g43470.1 7 Oryza sativa 3E-139 504 42 60 0 (0) C
Os10g26070.1 7 Oryza sativa 2E-121 496 39 59 0 (0) M
Os01g08120.1 7 Oryza sativa 2E-118 488 39 59 0 (0) M
v1_GRMZM2G423538_P01 4a53 Zea mays 2E-143 504 42 61 0 (0) C
GRMZM2G423538_P01 3.21 Zea mays 2E-143 504 42 61 0 (0) C
Zm00001eb051000_P001 agpv5 Zea mays 2E-143 504 42 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BTAD(3) PPR(12) PPR_1(8) PPR_2(10) PPR_3(7) PPR_long(3) TPR_14(1)
TargetP:	Chloroplast (Class 4 C0.604; M0.035; S0.112; _0.259)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	559 aa (-cTP 545)
Molecular Weight	62.66 kDA(-cTP 61.24)
PI	5.48(-cTP 5.48)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data