PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G42810.1   protein phosphatase 5.2

Lab Annot. PAPP5/PP5 (PROTEIN PHOSPHATASE 5); protein serine/threonine phosphatase
Mapman: 29.4.5 protein.postranslational modification.phosphatase
Curated Location
TAIR curated location: integral to endoplasmic reticulum membrane & nuclear envelope & nucleus & cytoplasm12972652,15707897
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42810.4 11Arabidopsis thaliana04841001000 (0)_
AT2G42810.5 11Arabidopsis thaliana04841001000 (0)_
AT2G42810.3 11Arabidopsis thaliana053790900 (0)_
Os05g11550.1 7Oryza sativa0479809236 (36)_
Os05g11550.2 7Oryza sativa0437809136 (36)_
Os08g35440.1 7Oryza sativa7E-7125745630 (0)_
Zm00001eb283980_P005 agpv5Zea mays047881910 (0)_
GRMZM2G126435_P02 3.21Zea mays0459829318 (17)_
v1_GRMZM2G126435_P02 4a53Zea mays0459829315 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC3(1) BTAD(1) Metallophos(1) MIT(2) PPP5(1) TPR_1(3) TPR_11(3) TPR_12(2) TPR
TargetP: Cytoplasm (Class 1 C0.069; M0.092; S0.093; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 484 aa (-cTP 472)
Molecular Weight 54.70 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

16502469(cell suspension-CD-down)
17216043(leaf)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help