PPDB

The Plant Proteome Database

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AT2G42620.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15475.1 11Arabidopsis thaliana8E-0725824400 (0)_
Os06g06050.1 7Oryza sativa072246610 (0)_
Os11g42160.1 7Oryza sativa7E-0823928450 (0)_
Zm00001eb270950_P001 agpv5Zea mays071348610 (0)_
v1_GRMZM2G405203_P01 4a53Zea mays071247610 (0)_
Zm00001eb376660_P001 agpv5Zea mays071247610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box_5(1)
TargetP: Chloroplast (Class 2 C0.868; M0.032; S0.007; _0.203)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 693 aa (-cTP 642)
Molecular Weight 77.41 kDA(-cTP 71.85)
PI 5.37(-cTP 5.20)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help