PPDB

PPDB	The Plant Proteome Database

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AT2G42360.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42350.1 11 Arabidopsis thaliana 1E-73 238 57 67 0 (0) _
AT3G16720.1 11 Arabidopsis thaliana 9E-29 274 33 46 0 (0) _
AT3G62690.1 11 Arabidopsis thaliana 3E-25 163 39 54 0 (0) _
Os05g07140.1 7 Oryza sativa 1E-25 156 39 53 0 (0) S
Os01g55110.1 7 Oryza sativa 6E-25 196 36 49 0 (0) _
Os01g11520.1 7 Oryza sativa 1E-19 158 35 50 0 (0) _
Zm00001eb152830_P001 agpv5 Zea mays 2E-25 214 34 50 0 (0) _
GRMZM2G028234_P01 3.21 Zea mays 2E-25 214 34 50 0 (0) _
v1_GRMZM2G028234_P01 4a53 Zea mays 2E-25 214 34 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1272(1) DUF2207(1) FANCL_C(1) OrfB_Zn_ribbon(2) Prok-RING_1(1) Prok-RING_4(1)
TargetP:	Cytoplasm (Class 2 C0.234; M0.084; S0.008; _0.914)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	236 aa (-cTP 161)
Molecular Weight	26.44 kDA(-cTP )
PI	8.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data