PPDB

PPDB	The Plant Proteome Database

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AT2G42330.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein

Lab Annot.

GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42330.3 11 Arabidopsis thaliana 0 752 100 100 0 (0) _
AT2G42330.2 11 Arabidopsis thaliana 0 752 100 100 4 (0) _
AT1G17070.1 11 Arabidopsis thaliana 0 821 61 71 2 (2) _
Os12g42140.1 7 Oryza sativa 0 662 43 62 0 (0) _
Os01g41670.1 7 Oryza sativa 1E-38 339 30 50 0 (0) _
Os04g43324.1 7 Oryza sativa 5E-32 336 31 48 0 (0) _
Zm00001eb135930_P001 agpv5 Zea mays 0 656 44 62 0 (0) _
v1_GRMZM2G114584_P03 4a53 Zea mays 0 656 44 62 39 (39) _
GRMZM2G114584_P03 3.21 Zea mays 0 656 44 62 34 (34) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	G-patch(1) G-patch_2(1) GCFC(1) TIP_N(1) Toprim_C_rpt(1)
TargetP:	Cytoplasm (Class 2 C0.147; M0.068; S0.048; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	752 aa (-cTP 705)
Molecular Weight	86.52 kDA(-cTP )
PI	7.94(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data