PPDB

The Plant Proteome Database

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AT2G42300.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42300.4 11Arabidopsis thaliana02701001000 (0)_
AT2G42300.3 11Arabidopsis thaliana2E-164224991000 (0)_
AT2G42300.5 11Arabidopsis thaliana2E-164224991000 (0)_
Os09g32510.5 7Oryza sativa1E-4013059760 (0)_
Os06g16400.1 7Oryza sativa2E-4013556720 (0)_
Os06g16400.2 7Oryza sativa2E-4013556720 (0)_
v1_GRMZM2G378653_P02 4a53Zea mays8E-6328648590 (0)C
GRMZM2G378653_P02 3.21Zea mays8E-6328648590 (0)C
Zm00001eb388300_P001 agpv5Zea mays2E-6028547580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4770(1) HLH(1) Mucin-like(3)
TargetP: Cytoplasm (Class 3 C0.022; M0.342; S0.024; _0.757)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 327 aa (-cTP 319)
Molecular Weight 36.19 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help