PPDB

The Plant Proteome Database

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AT2G42280.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42280.3 11Arabidopsis thaliana0341991000 (0)_
AT2G42280.2 11Arabidopsis thaliana02961001000 (0)_
AT1G51140.1 11Arabidopsis thaliana6E-5338238520 (0)_
Os08g39630.1 7Oryza sativa8E-7040441530 (0)_
Os09g31300.1 7Oryza sativa9E-5126942540 (0)C
Os09g31300.2 7Oryza sativa4E-4826942530 (0)C
Zm00001eb106720_P001 agpv5Zea mays3E-6836642550 (0)_
Zm00001eb106720_P002 agpv5Zea mays3E-6836642550 (0)_
v1_GRMZM2G142932_P02 4a53Zea mays3E-6836642550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(2)
TargetP: Cytoplasm (Class 4 C0.081; M0.298; S0.024; _0.678)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 359 aa (-cTP 284)
Molecular Weight 39.91 kDA(-cTP )
PI 7.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help