PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G42080.1   Chaperone DnaJ-domain superfamily protein

Lab Annot. J-domain protein DjC70 (type 3)
Mapman: 26.29* misc. DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G58020.1 11Arabidopsis thaliana6E-9426758690 (0)_
AT2G42065.1 11Arabidopsis thaliana3E-287671770 (0)C
AT2G18465.1 11Arabidopsis thaliana4E-177054700 (0)C
Os07g28800.1 7Oryza sativa3E-4325842550 (0)M
Os05g01590.1 7Oryza sativa4E-1915540510 (0)M
Os04g59060.1 7Oryza sativa2E-1713239510 (0)M
GRMZM2G171884_P03 3.21Zea mays2E-4326338540 (0)C
Zm00001eb320120_P003 agpv5Zea mays2E-4326338540 (0)C
v1_GRMZM2G171884_P03 4a53Zea mays2E-4326338540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DnaJ(2)
TargetP: Chloroplast (Class 4 C0.762; M0.526; S0.006; _0.029)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 263 aa (-cTP 213)
Molecular Weight 30.84 kDA(-cTP 24.95)
PI 9.04(-cTP 6.16)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help