PPDB

PPDB	The Plant Proteome Database

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AT2G42060.1 Cysteine/Histidine-rich C1 domain family protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27660.1 11 Arabidopsis thaliana 2E-28 186 36 49 0 (0) C
AT2G44380.1 11 Arabidopsis thaliana 4E-26 257 30 47 0 (0) M
AT2G44370.1 11 Arabidopsis thaliana 4E-26 251 30 47 0 (0) M
Os07g41930.1 7 Oryza sativa 7E-14 246 28 39 0 (0) M
Os07g42070.1 7 Oryza sativa 8E-13 262 27 40 0 (0) _
Os07g42030.1 7 Oryza sativa 7E-12 215 27 40 0 (0) _
Zm00001eb102060_P001 agpv5 Zea mays 9E-15 195 32 44 0 (0) _
AC230021.2_FGP002 3.21 Zea mays 9E-15 195 32 44 0 (0) _
v1_AC230021.2_FGP002 4a53 Zea mays 9E-15 195 32 44 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(3) C1_2(3) NuA4(1) PHD(3) Zf_RING(3) zinc-ribbons_6(3) Zn_ribbon_17(3)
TargetP:	Cytoplasm (Class 4 C0.345; M0.141; S0.057; _0.650)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	268 aa (-cTP 231)
Molecular Weight	29.36 kDA(-cTP )
PI	5.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data