PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G41980.1 Protein with RING/U-box and TRAF-like domain

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G58040.1 11 Arabidopsis thaliana 0 308 92 95 0 (0) _
AT3G58040.3 11 Arabidopsis thaliana 0 308 92 95 0 (0) _
AT3G61790.1 11 Arabidopsis thaliana 5E-161 263 79 88 0 (0) _
Os01g13370.1 7 Oryza sativa 1E-159 255 80 90 0 (0) _
Os03g24040.1 7 Oryza sativa 1E-159 258 79 88 0 (0) _
Os07g46560.1 7 Oryza sativa 3E-159 258 79 87 0 (0) _
Zm00001eb237020_P001 agpv5 Zea mays 3E-161 258 79 89 0 (0) _
v1_GRMZM2G081075_P01 4a53 Zea mays 3E-161 258 79 89 0 (0) _
GRMZM2G081075_P01 3.21 Zea mays 3E-161 258 79 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RNA_POL_M_15KD(1) Sina(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-Di19(1) zf-
TargetP:	Cytoplasm (Class 2 C0.158; M0.053; S0.043; _0.885)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	305 aa (-cTP 276)
Molecular Weight	34.56 kDA(-cTP )
PI	7.86(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data