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AT2G41950.1
DNA-directed RNA polymerase subunit beta
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| Lab Annot. |
unknown protein
Mapman: 35.2 not assigned.unknown |
| Curated Location |
plastid stroma (Pubmed: 23198870 18431481 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
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| TargetP: |
Chloroplast (Class 1 C0.955; M0.034; S0.022; _0.008) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
266 aa (-cTP 192) |
| Molecular Weight |
30.02 kDA(-cTP 21.93) |
| PI |
5.55(-cTP 4.84) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 339 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 622 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 874 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1455 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 1) |
| 1457 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1458 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clps (rep. 1) |
| 1459 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clps (rep. 2) |
| 1460 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clps (rep. 3) |
| 1461 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 1) |
| 1462 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 2) |
| 1463 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 (rep. 3) |
| 1482 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 1) |
| 1483 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1484 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 2) |
| 1485 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1942 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1943 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1945 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1946 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | wild-type |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 1948 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 1949 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2000 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS1 |
| 2001 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS1 |
| 2002 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS1 |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2113 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2114 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2116 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | cGep |
| 2314 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2316 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2318 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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17526915(glycoproteome cell wall (stems))
18431481(chloroplast)
20423899(chloroplast)
19995723(chloroplast reference proteome)
21173025(root proteome)
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Comparative Proteomics Data
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