PPDB

PPDB	The Plant Proteome Database

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AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein

Lab Annot.

CCCH-type zinc finger protein with ARM repeat domain
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G12850.1 11 Arabidopsis thaliana 0 701 51 66 0 (0) _
AT5G58620.1 11 Arabidopsis thaliana 3E-144 660 41 55 0 (0) S
AT2G40140.1 11 Arabidopsis thaliana 7E-124 700 37 51 0 (0) _
Os03g49170.3 7 Oryza sativa 0 734 56 69 0 (0) _
Os03g49170.1 7 Oryza sativa 0 734 56 69 0 (0) _
Os12g33090.1 7 Oryza sativa 2E-169 697 46 57 0 (0) _
Zm00001eb216910_P002 agpv5 Zea mays 0 733 57 69 0 (0) _
v1_GRMZM2G001279_P01 4a53 Zea mays 0 734 55 67 1 (1) _
v1_GRMZM2G180979_P01 4a53 Zea mays 0 733 57 69 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(2) Ank_2(1) Ank_3(2) Ank_4(2) Ank_5(2) Cadherin_tail(1) DUF2574(1) zf-CCCH(3
TargetP:	Cytoplasm (Class 4 C0.122; M0.163; S0.280; _0.508)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	716 aa (-cTP 695)
Molecular Weight	77.99 kDA(-cTP )
PI	5.93(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data