PPDB

 The Plant Proteome Database

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AT2G41850.1   polygalacturonase ADPG2-like protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G57510.1 11Arabidopsis thaliana043469800 (0)S
AT3G07970.1 11Arabidopsis thaliana2E-13744348650 (0)S
AT1G80170.1 11Arabidopsis thaliana6E-11435049682 (0)S
Os07g10680.1 7Oryza sativa6E-13436756720 (0)S
Os07g10740.1 7Oryza sativa4E-13340451670 (0)S
Os07g10700.1 7Oryza sativa3E-13234855730 (0)S
Zm00001eb061780_P001 agpv5Zea mays5E-13838551720 (0)S
GRMZM2G111609_P01 3.21Zea mays5E-13838551720 (0)S
v1_GRMZM2G111609_P01 4a53Zea mays5E-13838551720 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Beta_helix(2) End_N_terminal(2) Glyco_hydro_28(1) Pectate_lyase_3(2)
TargetP: Secreted (Class 2 C0.010; M0.147; S0.878; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 433 aa (-cTP 374)
Molecular Weight 46.62 kDA(-cTP )
PI 8.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help