PPDB

The Plant Proteome Database

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AT2G41800.1   imidazolonepropionase (Protein of unknown function%2C DUF642)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41810.1 11Arabidopsis thaliana036979872 (2)S
AT3G08030.1 11Arabidopsis thaliana3E-1553406175242 (146)S
AT3G08030.2 11Arabidopsis thaliana6E-1483206275241 (145)_
Os03g59300.1 7Oryza sativa4E-142340607425 (25)S
Os03g59300.2 7Oryza sativa2E-122291607418 (18)M
Os01g42520.1 7Oryza sativa1E-11833351660 (0)S
Zm00001eb061750_P001 agpv5Zea mays6E-14234659730 (0)S
GRMZM2G012224_P01 3.21Zea mays6E-142346597333 (33)S
v1_GRMZM2G012224_P01 4a53Zea mays6E-142346597331 (31)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF642(2)
TargetP: Secreted (Class 4 C0.057; M0.140; S0.369; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 325)
Molecular Weight 40.37 kDA(-cTP )
PI 9.22(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
16287169(Cell Wall proteome)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
20706207(contaminants cell cycle interactome (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help